ICD-10-CM · Spine

M46.39

Pyogenic (bacterial) infection involving intervertebral discs at more than one spinal region simultaneously, classified under other inflammatory spondylopathies.

Verified May 8, 2026 · 5 sources ↓

Status
Billable
Chapter
13
Related CPT
10
Region
Spine
Drawn from CDCICD10DataAAPCIcdcodesCMS

Documentation tips

What should appear in the chart to support M46.39.

Source · Editorial brief grounded in 5 cited references ↓

  • Explicitly name every spinal region involved (e.g., 'cervical and lumbar discitis') — generic language like 'multilevel' without naming regions is insufficient to support M46.39 over an unspecified code.
  • Add a B95–B97 infectious-agent code every time M46.39 is billed; this is a 'Use Additional Code' instruction on the parent M46.3 and is required, not optional.
  • Record MRI findings supporting each affected disc: T2 hyperintensity, endplate erosion, paravertebral or epidural signal abnormality — note all levels individually.
  • Document lab markers (ESR, CRP, WBC, blood cultures, disc aspiration culture results) to substantiate active pyogenic infection and support medical necessity for imaging and surgical intervention.
  • If the patient is immunocompromised (diabetes, HIV, post-transplant), document comorbidities separately; they drive MCC/CC assignment and affect DRG reimbursement tied to M46.39.
  • Specify whether the infection is hematogenous, post-procedural, or contiguous spread — this context supports accurate etiologic coding and may require additional codes.

Related CPT procedures

Procedure codes commonly billed with M46.39. Linking the right diagnosis to the right procedure is what establishes medical necessity.

Source · CMS LCDs · AAOS specialty guidance · claims-pattern analysis

22558 $1,423.88
Anterior interbody arthrodesis of the lumbar spine using an anterior or anterolateral approach, including the minimal discectomy required to prepare the interspace for fusion.
22600 $1,282.93
Posterior or posterolateral cervical spinal fusion at a single interspace below C2, performed through a posterior approach to achieve bony arthrodesis.
22612 $1,467.64
Posterior or posterolateral lumbar arthrodesis of a single interspace, performed via a posterior approach with bone graft and typically pedicle screw fixation to achieve vertebral segment fusion.
22630 $1,510.72
Posterior interbody arthrodesis of a single lumbar interspace, including laminectomy and/or discectomy performed to prepare the interspace for fusion rather than for decompression.
22800 $1,312.99
Posterior spinal arthrodesis for deformity correction spanning up to 6 vertebral segments, with or without application of a body cast.
22853 $228.80
Add-on code for inserting an interbody biomechanical device (e.g., synthetic cage or mesh) with integral anterior anchoring instrumentation into an intervertebral disc space, performed alongside interbody arthrodesis, reported once per interspace.
72148 $191.72
Non-contrast MRI of the lumbar spine used to evaluate disc pathology, spinal stenosis, nerve root compression, and other structural abnormalities without administration of contrast material.
72158 $318.31
MRI of the lumbar spinal canal and its contents performed first without contrast, then repeated after contrast administration for enhanced visualization.
20220 $223.12
Percutaneous bone biopsy of a superficial bone using a trocar or needle, yielding tissue for diagnostic analysis.
62323 View procedure details

Common coding pitfalls

The recurring mistakes coders make with M46.39 and adjacent codes.

Source · Editorial brief grounded in CDC ICD-10-CM tabular guidance, AAOS coding references, and cited references ↓

  • Assigning M46.39 without a B95–B97 organism code violates the 'Use Additional Code' instruction on M46.3 and can trigger claim denial or audit.
  • Using M46.39 when only one spinal region is involved — select the single-site M46.3x code (e.g., M46.36 for lumbar) instead.
  • Confusing M46.39 (pyogenic, multiple sites) with M46.49 (discitis unspecified, multiple sites) — M46.39 requires documented or presumed bacterial etiology; use M46.49 only when the infectious nature or organism type is genuinely unspecified.
  • Failing to update the infectious-agent code after culture results return; an initial 'unknown organism' placeholder should be refined once microbiology is available.
  • Overlooking concurrent vertebral osteomyelitis codes (M46.2x) when imaging shows endplate involvement extending into vertebral bodies — M46.39 addresses disc infection, but contiguous osteomyelitis may warrant dual coding.

Clinical context

Source · Editorial summary grounded in 5 cited references ↓

M46.39 is the correct code when documented pyogenic discitis affects multiple, non-contiguous or contiguous spinal regions — for example, both the cervical and lumbar spine, or the thoracic and lumbosacral regions together. It is not a catch-all for unspecified discitis; the pyogenic (bacterial) etiology must be established or presumed. If only a single spinal region is infected, use the site-specific M46.3x sibling codes (M46.31–M46.38).

A critical coding requirement under the parent category M46.3: always add a secondary code from B95–B97 to identify the causative organism (e.g., B95.61 for MRSA, B96.20 for unspecified E. coli). Payers and auditors will flag M46.39 claims that lack an infectious-agent code. If the organism is not yet identified at the time of initial coding, document that culture results are pending and update the claim when results are available.

MS-DRG mapping for M46.39 runs across spinal fusion DRGs (456–458) and osteomyelitis DRGs (539–541), depending on the procedures performed and the presence of complicating comorbidities. The DRG selected has significant reimbursement implications, so accurate capture of MCC/CC status alongside M46.39 is essential. Approximate synonyms accepted under this code include pyogenic disc inflammation of multiple sites, pyogenic discitis of multiple sites, and pyogenic infection of multiple intervertebral discs.

Sibling codes

Other billable codes under M46.3 (laterality / anatomic variants).

Frequently asked questions

Source · Generated from the editorial pipeline, verified against 5 cited references ↓

01Do I need a separate code to identify the bacteria causing the infection?
Yes. The parent category M46.3 carries a 'Use Additional Code' instruction requiring a B95–B97 code to identify the infectious agent. Submitting M46.39 alone is non-compliant and risks claim denial.
02What is the difference between M46.39 and M46.49?
M46.39 specifies pyogenic (bacterial) discitis at multiple spinal sites. M46.49 is discitis of unspecified type at multiple sites and should only be used when the etiology is genuinely not established. If bacterial infection is documented or presumed, M46.39 is the correct code.
03How many spinal regions must be affected to use M46.39 instead of a single-site code?
Two or more distinct spinal regions must be documented as infected. A single region with multilevel disc involvement still maps to the single-site sibling code (e.g., M46.36 for lumbar). M46.39 is reserved for infections spanning more than one named spinal region.
04Which DRGs does M46.39 map to, and how does that affect reimbursement?
M46.39 groups to spinal fusion DRGs 456–458 (when fusion is performed) or osteomyelitis DRGs 539–541. The specific DRG — and its payment weight — hinges on whether an MCC or CC is present, so complete comorbidity documentation is essential.
05Can M46.39 be used for post-procedural disc infections following spine surgery?
Post-procedural spinal infections may require additional complication codes (e.g., T81.4xx or T84.7xx series) depending on the clinical scenario. M46.39 may be listed as a component diagnosis, but the post-procedural complication code should be sequenced first when the infection is a direct result of a procedure — follow ICD-10-CM Official Guidelines for sequencing.
06Is imaging required to support M46.39 coding?
Clinical coding doesn't mandate imaging, but MRI is the standard diagnostic tool for pyogenic discitis — T2 hyperintensity and endplate erosion at the affected levels. Documenting MRI findings strengthens medical necessity and reduces audit exposure, especially across multiple spinal regions.
07Should I also code vertebral osteomyelitis if the infection has spread to the vertebral bodies?
Yes. If imaging or clinical documentation confirms vertebral body involvement, code concurrent vertebral osteomyelitis (M46.2x, site-specific) alongside M46.39. Disc infection and vertebral osteomyelitis are distinct conditions that can coexist and should both be captured.

Sources & references

Editorial content was developed using the following public sources. Last verified May 8, 2026.

  1. 01CDC ICD-10-CM Tabular List 2026 (effective October 1, 2025)
  2. 02
    icd10data.com
    https://www.icd10data.com/ICD10CM/Codes/M00-M99/M45-M49/M46-/M46.39
  3. 03
    aapc.com
    https://www.aapc.com/codes/icd-10-codes/M46.3
  4. 04
    icdcodes.ai
    https://icdcodes.ai/icd10/M46.39
  5. 05
    cms.gov
    https://www.cms.gov/Medicare/Coding/ICD10/Downloads/2019-ICD10-Coding-Guidelines-.pdf

Mira AI Scribe

Mira's AI scribe captures the number and names of affected spinal regions, MRI findings at each level (T2 signal, endplate erosion), culture or blood culture results identifying the organism, and lab inflammatory markers — then auto-suggests the required B95–B97 co-code. This prevents claim rejection for missing infectious-agent codes and avoids downcoding to unspecified discitis when multi-region pyogenic involvement is clearly documented.

See how Mira captures M46.39 documentation

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